BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (215 letters)

Distribution of 88 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           295   1e-80 

>GCTS_68 
          Length = 6534396

 Score =  295 bits (149), Expect = 1e-80
 Identities = 152/153 (99%)
 Strand = Plus / Plus

                                                                          
Query: 59     taggcccagcggaagcgctgcttcttgaagtcgatgaaggtatcgggcatcaccaccttg 118
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 566120 taggcccagcggaagcgctgcttcttgaagtcgatgaaggtatcgggcatcacccccttg 566179

                                                                          
Query: 119    ccgtagctgcgctcgaagtaggcggccgacaggcccttctcgaacacccgcaggcccagc 178
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566180 ccgtagctgcgctcgaagtaggcggccgacaggcccttctcgaacacccgcaggcccagc 566239

                                               
Query: 179    tcggcgtcttcggtgatgcaccattccggccat 211
              |||||||||||||||||||||||||||||||||
Sbjct: 566240 tcggcgtcttcggtgatgcaccattccggccat 566272




 Score = 36.2 bits (18), Expect = 0.017
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 169     caggcccagctcggcgtc 186
               ||||||||||||||||||
Sbjct: 6018959 caggcccagctcggcgtc 6018942




 Score = 34.2 bits (17), Expect = 0.067
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 116     ttgccgtagctgcgctc 132
               |||||||||||||||||
Sbjct: 6220598 ttgccgtagctgcgctc 6220614




 Score = 32.2 bits (16), Expect = 0.26
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 164    acccgcaggcccagctcggc 183
              |||||| |||||||||||||
Sbjct: 279054 acccgctggcccagctcggc 279073




 Score = 32.2 bits (16), Expect = 0.26
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 169     caggcccagctcggcg 184
               ||||||||||||||||
Sbjct: 1255791 caggcccagctcggcg 1255806




 Score = 32.2 bits (16), Expect = 0.26
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 90      cgatgaaggtatcgggcatc 109
               ||||||||||||||| ||||
Sbjct: 1510829 cgatgaaggtatcggacatc 1510848




 Score = 32.2 bits (16), Expect = 0.26
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 175     cagctcggcgtcttcg 190
               ||||||||||||||||
Sbjct: 2341216 cagctcggcgtcttcg 2341201




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 101     tcgggcatcaccacc 115
               |||||||||||||||
Sbjct: 1337585 tcgggcatcaccacc 1337599




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 167     cgcaggcccagctcg 181
               |||||||||||||||
Sbjct: 1581966 cgcaggcccagctcg 1581980




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 180     cggcgtcttcggtga 194
               |||||||||||||||
Sbjct: 1626460 cggcgtcttcggtga 1626446




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 167     cgcaggcccagctcg 181
               |||||||||||||||
Sbjct: 1665697 cgcaggcccagctcg 1665683




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 170     aggcccagctcggcg 184
               |||||||||||||||
Sbjct: 2984892 aggcccagctcggcg 2984906




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 195     tgcaccattccggcc 209
               |||||||||||||||
Sbjct: 3005049 tgcaccattccggcc 3005063




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 183     cgtcttcggtgatgc 197
               |||||||||||||||
Sbjct: 3142495 cgtcttcggtgatgc 3142481




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 172     gcccagctcggcgtc 186
               |||||||||||||||
Sbjct: 3738308 gcccagctcggcgtc 3738294




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 172     gcccagctcggcgtc 186
               |||||||||||||||
Sbjct: 4522898 gcccagctcggcgtc 4522884




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 139     ggcggccgacaggcc 153
               |||||||||||||||
Sbjct: 4891051 ggcggccgacaggcc 4891037




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 69      ggaagcgctgcttct 83
               |||||||||||||||
Sbjct: 5181120 ggaagcgctgcttct 5181106




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 163     cacccgcaggcccagctcg 181
               |||| ||||||||||||||
Sbjct: 5269362 caccggcaggcccagctcg 5269380




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 163     cacccgcaggcccagctcg 181
               |||||||||||||| ||||
Sbjct: 5373528 cacccgcaggcccatctcg 5373546




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 169     caggcccagctcggc 183
               |||||||||||||||
Sbjct: 5520071 caggcccagctcggc 5520085




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 163     cacccgcaggcccagctcg 181
               ||||||||||||| |||||
Sbjct: 5597367 cacccgcaggcccggctcg 5597385




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 67      gcggaagcgctgctt 81
               |||||||||||||||
Sbjct: 5700272 gcggaagcgctgctt 5700258




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 169     caggcccagctcggc 183
               |||||||||||||||
Sbjct: 5812778 caggcccagctcggc 5812764




 Score = 30.2 bits (15), Expect = 1.0
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 151     gcccttctcgaacacccgc 169
               ||||| |||||||||||||
Sbjct: 6171656 gccctactcgaacacccgc 6171638




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 108    tcaccaccttgccg 121
              ||||||||||||||
Sbjct: 148179 tcaccaccttgccg 148166




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 184    gtcttcggtgatgc 197
              ||||||||||||||
Sbjct: 474677 gtcttcggtgatgc 474664




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 172    gcccagctcggcgt 185
              ||||||||||||||
Sbjct: 573451 gcccagctcggcgt 573438




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 115    cttgccgtagctgc 128
              ||||||||||||||
Sbjct: 589926 cttgccgtagctgc 589913




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 124    gctgcgctcgaagt 137
              ||||||||||||||
Sbjct: 632567 gctgcgctcgaagt 632580




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 139    ggcggccgacaggc 152
              ||||||||||||||
Sbjct: 870093 ggcggccgacaggc 870106




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 103     gggcatcaccacct 116
               ||||||||||||||
Sbjct: 1320805 gggcatcaccacct 1320792




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 109     caccaccttgccgt 122
               ||||||||||||||
Sbjct: 1397284 caccaccttgccgt 1397271




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 110     accaccttgccgtagctg 127
               |||| |||||||||||||
Sbjct: 1552146 accagcttgccgtagctg 1552129




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 177     gctcggcgtcttcg 190
               ||||||||||||||
Sbjct: 1765489 gctcggcgtcttcg 1765502




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 178     ctcggcgtcttcgg 191
               ||||||||||||||
Sbjct: 1832270 ctcggcgtcttcgg 1832257




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 85      gaagtcgatgaagg 98
               ||||||||||||||
Sbjct: 1872911 gaagtcgatgaagg 1872898




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 168     gcaggcccagctcg 181
               ||||||||||||||
Sbjct: 1884022 gcaggcccagctcg 1884009




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 96      aggtatcgggcatc 109
               ||||||||||||||
Sbjct: 1910350 aggtatcgggcatc 1910363




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 172     gcccagctcggcgt 185
               ||||||||||||||
Sbjct: 2150209 gcccagctcggcgt 2150196




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 164     acccgcaggcccag 177
               ||||||||||||||
Sbjct: 2361159 acccgcaggcccag 2361172




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 106     catcaccaccttgc 119
               ||||||||||||||
Sbjct: 2459429 catcaccaccttgc 2459416




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                     
Query: 130     ctcgaagtaggcggccgacagg 151
               |||||||||||||  |||||||
Sbjct: 2701738 ctcgaagtaggcgcgcgacagg 2701759




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 172     gcccagctcggcgt 185
               ||||||||||||||
Sbjct: 2759096 gcccagctcggcgt 2759109




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 131     tcgaagtaggcggc 144
               ||||||||||||||
Sbjct: 2780375 tcgaagtaggcggc 2780388




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 171     ggcccagctcggcg 184
               ||||||||||||||
Sbjct: 2983196 ggcccagctcggcg 2983183




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 169     caggcccagctcgg 182
               ||||||||||||||
Sbjct: 3055459 caggcccagctcgg 3055446




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 172     gcccagctcggcgt 185
               ||||||||||||||
Sbjct: 3262666 gcccagctcggcgt 3262679




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 151     gcccttctcgaaca 164
               ||||||||||||||
Sbjct: 3347908 gcccttctcgaaca 3347921




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 169     caggcccagctcgg 182
               ||||||||||||||
Sbjct: 3378729 caggcccagctcgg 3378716




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 158     tcgaacacccgcag 171
               ||||||||||||||
Sbjct: 3379052 tcgaacacccgcag 3379039




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 132     cgaagtaggcggcc 145
               ||||||||||||||
Sbjct: 3401804 cgaagtaggcggcc 3401817




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 84      tgaagtcgatgaag 97
               ||||||||||||||
Sbjct: 3440697 tgaagtcgatgaag 3440684




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 171     ggcccagctcggcg 184
               ||||||||||||||
Sbjct: 3495467 ggcccagctcggcg 3495454




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 164     acccgcaggcccag 177
               ||||||||||||||
Sbjct: 3543452 acccgcaggcccag 3543439




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 107     atcaccaccttgcc 120
               ||||||||||||||
Sbjct: 3558768 atcaccaccttgcc 3558781




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 148     caggcccttctcgaacac 165
               |||||| |||||||||||
Sbjct: 3562524 caggcctttctcgaacac 3562541




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 171     ggcccagctcggcg 184
               ||||||||||||||
Sbjct: 3573176 ggcccagctcggcg 3573163




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 181     ggcgtcttcggtga 194
               ||||||||||||||
Sbjct: 3677577 ggcgtcttcggtga 3677590




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 169     caggcccagctcgg 182
               ||||||||||||||
Sbjct: 3679178 caggcccagctcgg 3679165




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 173     cccagctcggcgtc 186
               ||||||||||||||
Sbjct: 3725521 cccagctcggcgtc 3725508




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 169     caggcccagctcgg 182
               ||||||||||||||
Sbjct: 3809675 caggcccagctcgg 3809688




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 60      aggcccagcggaag 73
               ||||||||||||||
Sbjct: 3974640 aggcccagcggaag 3974653




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 136     gtaggcggccgacaggcc 153
               ||||||||||| ||||||
Sbjct: 3977087 gtaggcggccgccaggcc 3977104




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 172     gcccagctcggcgt 185
               ||||||||||||||
Sbjct: 4083183 gcccagctcggcgt 4083196




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 109     caccaccttgccgt 122
               ||||||||||||||
Sbjct: 4145913 caccaccttgccgt 4145900




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 168     gcaggcccagctcg 181
               ||||||||||||||
Sbjct: 4628310 gcaggcccagctcg 4628323




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 171     ggcccagctcggcg 184
               ||||||||||||||
Sbjct: 4654799 ggcccagctcggcg 4654812




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 60      aggcccagcggaag 73
               ||||||||||||||
Sbjct: 4833057 aggcccagcggaag 4833070




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 175     cagctcggcgtcttcggt 192
               |||| |||||||||||||
Sbjct: 4860528 cagcacggcgtcttcggt 4860545




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 132     cgaagtaggcggcc 145
               ||||||||||||||
Sbjct: 4904028 cgaagtaggcggcc 4904041




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 163     cacccgcaggccca 176
               ||||||||||||||
Sbjct: 5099912 cacccgcaggccca 5099925




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 174     ccagctcggcgtcttcgg 191
               ||||||||||||| ||||
Sbjct: 5155524 ccagctcggcgtcgtcgg 5155541




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 117     tgccgtagctgcgc 130
               ||||||||||||||
Sbjct: 5194658 tgccgtagctgcgc 5194671




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 174     ccagctcggcgtcttcgg 191
               |||||||||||| |||||
Sbjct: 5339588 ccagctcggcgtgttcgg 5339571




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 168     gcaggcccagctcg 181
               ||||||||||||||
Sbjct: 5513377 gcaggcccagctcg 5513364




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 142     ggccgacaggcccttctc 159
               |||||||||||| |||||
Sbjct: 5907704 ggccgacaggccgttctc 5907687




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 80      ttcttgaagtcgat 93
               ||||||||||||||
Sbjct: 5909449 ttcttgaagtcgat 5909436




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 124     gctgcgctcgaagt 137
               ||||||||||||||
Sbjct: 5935906 gctgcgctcgaagt 5935893




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 106     catcaccaccttgc 119
               ||||||||||||||
Sbjct: 5953510 catcaccaccttgc 5953497




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 163     cacccgcaggccca 176
               ||||||||||||||
Sbjct: 6133955 cacccgcaggccca 6133968




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 160     gaacacccgcaggc 173
               ||||||||||||||
Sbjct: 6137967 gaacacccgcaggc 6137954




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 90      cgatgaaggtatcg 103
               ||||||||||||||
Sbjct: 6204006 cgatgaaggtatcg 6204019




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 109     caccaccttgccgt 122
               ||||||||||||||
Sbjct: 6326754 caccaccttgccgt 6326767




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 160     gaacacccgcaggc 173
               ||||||||||||||
Sbjct: 6327333 gaacacccgcaggc 6327346




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 178     ctcggcgtcttcgg 191
               ||||||||||||||
Sbjct: 6411727 ctcggcgtcttcgg 6411714




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 171     ggcccagctcggcg 184
               ||||||||||||||
Sbjct: 6503134 ggcccagctcggcg 6503121




 Score = 28.2 bits (14), Expect = 4.1
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 66      agcggaagcgctgc 79
               ||||||||||||||
Sbjct: 6528761 agcggaagcgctgc 6528748




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2100
Number of Sequences: 1
Number of extensions: 2100
Number of successful extensions: 88
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of query: 215
length of database: 6,534,396
effective HSP length: 15
effective length of query: 200
effective length of database: 6,534,381
effective search space: 1306876200
effective search space used: 1306876200
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)