BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (290 letters)

Distribution of 123 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           272   2e-73 

>GCTS_68 
          Length = 6534396

 Score =  272 bits (137), Expect = 2e-73
 Identities = 152/157 (96%)
 Strand = Plus / Plus

                                                                           
Query: 134     cgcaacgtgaaggaggcgtcctgacatggccttctcgacccaggacagcgacgaagtcct 193
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6026997 cgcaacgtgaaggaggcgtcctgacatggccttctcgacccaggacagcgacgaagtcct 6027056

                                                                           
Query: 194     ttccgaaatcaacgtcaccccgctggtcgacgtgatgctggagctgctggtggagtttat 253
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||
Sbjct: 6027057 ttccgaaatcaacgtcaccccgctggtcgacgtgatgctggtgctgctggtggtgttcat 6027116

                                                    
Query: 254     attcaccgcgccgctgctgaccaactcgatcccgatc 290
                 |||||||||||||||||||||||||||||||||||
Sbjct: 6027117 cgtcaccgcgccgctgctgaccaactcgatcccgatc 6027153




 Score =  109 bits (55), Expect = 2e-24
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                      
Query: 59      tacagcctggcgcagaagagcgcgttccgcgtcatcgtccatccctccgccgcgc 113
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6026922 tacagcctggcgcagaagagcgcgttccgcgtcatcgtccatccctccgccgcgc 6026976




 Score = 42.1 bits (21), Expect = 4e-04
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 201   atcaacgtcaccccgctggtcgacgtgatgctggagctgctggtg 245
             |||||| ||||||||||||| |||||| || ||| | ||||||||
Sbjct: 40737 atcaacatcaccccgctggtggacgtgctgatggtggtgctggtg 40781




 Score = 36.2 bits (18), Expect = 0.023
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 220    tcgacgtgatgctggagctgctggtg 245
              |||||||||||||||  |||||||||
Sbjct: 356996 tcgacgtgatgctggtactgctggtg 357021




 Score = 36.2 bits (18), Expect = 0.023
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 202     tcaacgtcaccccgctgg 219
               ||||||||||||||||||
Sbjct: 3305930 tcaacgtcaccccgctgg 3305913




 Score = 34.2 bits (17), Expect = 0.091
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 168    tcgacccaggacagcga 184
              |||||||||||||||||
Sbjct: 472429 tcgacccaggacagcga 472445




 Score = 32.2 bits (16), Expect = 0.36
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 260     cgcgccgctgctgacc 275
               ||||||||||||||||
Sbjct: 2157282 cgcgccgctgctgacc 2157297




 Score = 32.2 bits (16), Expect = 0.36
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 165     ttctcgacccaggacagcga 184
               ||||| ||||||||||||||
Sbjct: 2352403 ttctccacccaggacagcga 2352422




 Score = 32.2 bits (16), Expect = 0.36
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 258     accgcgccgctgctga 273
               ||||||||||||||||
Sbjct: 2618227 accgcgccgctgctga 2618212




 Score = 32.2 bits (16), Expect = 0.36
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 266     gctgctgaccaactcg 281
               ||||||||||||||||
Sbjct: 3536898 gctgctgaccaactcg 3536883




 Score = 32.2 bits (16), Expect = 0.36
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 236     gctgctggtggagttt 251
               ||||||||||||||||
Sbjct: 3994726 gctgctggtggagttt 3994741




 Score = 32.2 bits (16), Expect = 0.36
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 257     caccgcgccgctgctg 272
               ||||||||||||||||
Sbjct: 4483035 caccgcgccgctgctg 4483020




 Score = 32.2 bits (16), Expect = 0.36
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 65      ctggcgcagaagagcg 80
               ||||||||||||||||
Sbjct: 5541506 ctggcgcagaagagcg 5541521




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 191    cctttccgaaatcaa 205
              |||||||||||||||
Sbjct: 193535 cctttccgaaatcaa 193521




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 264    ccgctgctgaccaac 278
              |||||||||||||||
Sbjct: 450819 ccgctgctgaccaac 450833




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 229    tgctggagctgctgg 243
              |||||||||||||||
Sbjct: 507177 tgctggagctgctgg 507191




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                     
Query: 208    tcaccccgctggtcgacgtgatg 230
              |||||||||||| ||||| ||||
Sbjct: 519518 tcaccccgctggacgacgagatg 519540




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 259     ccgcgccgctgctga 273
               |||||||||||||||
Sbjct: 1160837 ccgcgccgctgctga 1160823




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 255     ttcaccgcgccgctg 269
               |||||||||||||||
Sbjct: 1288021 ttcaccgcgccgctg 1288007




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 236     gctgctggtggagtt 250
               |||||||||||||||
Sbjct: 1447809 gctgctggtggagtt 1447823




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 234     gagctgctggtggag 248
               |||||||||||||||
Sbjct: 1670333 gagctgctggtggag 1670347




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 229     tgctggagctgctgg 243
               |||||||||||||||
Sbjct: 1930142 tgctggagctgctgg 1930156




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 170     gacccaggacagcga 184
               |||||||||||||||
Sbjct: 1933296 gacccaggacagcga 1933310




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 256     tcaccgcgccgctgctgac 274
               |||||||||||| ||||||
Sbjct: 2091874 tcaccgcgccgccgctgac 2091892




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 258     accgcgccgctgctg 272
               |||||||||||||||
Sbjct: 2304951 accgcgccgctgctg 2304965




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 225     gtgatgctggagctg 239
               |||||||||||||||
Sbjct: 2622125 gtgatgctggagctg 2622111




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 229     tgctggagctgctgg 243
               |||||||||||||||
Sbjct: 2746646 tgctggagctgctgg 2746660




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 262     cgccgctgctgacca 276
               |||||||||||||||
Sbjct: 2772969 cgccgctgctgacca 2772983




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 175     aggacagcgacgaag 189
               |||||||||||||||
Sbjct: 3243712 aggacagcgacgaag 3243698




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 63      gcctggcgcagaagagcgc 81
               |||||||||||||| ||||
Sbjct: 3296492 gcctggcgcagaagcgcgc 3296474




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 159     atggccttctcgacc 173
               |||||||||||||||
Sbjct: 3487902 atggccttctcgacc 3487916




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 123     gggcctggccacgca 137
               |||||||||||||||
Sbjct: 3551648 gggcctggccacgca 3551662




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 261     gcgccgctgctgacc 275
               |||||||||||||||
Sbjct: 4025499 gcgccgctgctgacc 4025485




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 229     tgctggagctgctgg 243
               |||||||||||||||
Sbjct: 4050429 tgctggagctgctgg 4050443




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 236     gctgctggtggagtt 250
               |||||||||||||||
Sbjct: 4297279 gctgctggtggagtt 4297265




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 61      cagcctggcgcagaa 75
               |||||||||||||||
Sbjct: 4966363 cagcctggcgcagaa 4966349




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 141     tgaaggaggcgtcct 155
               |||||||||||||||
Sbjct: 5261603 tgaaggaggcgtcct 5261617




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 204     aacgtcaccccgctg 218
               |||||||||||||||
Sbjct: 5305015 aacgtcaccccgctg 5305001




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 173     ccaggacagcgacga 187
               |||||||||||||||
Sbjct: 5542214 ccaggacagcgacga 5542228




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 256     tcaccgcgccgctgctgac 274
               |||||||||||| ||||||
Sbjct: 5852731 tcaccgcgccgccgctgac 5852713




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 256     tcaccgcgccgctgc 270
               |||||||||||||||
Sbjct: 6181825 tcaccgcgccgctgc 6181839




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 229     tgctggagctgctgg 243
               |||||||||||||||
Sbjct: 6197789 tgctggagctgctgg 6197775




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 256     tcaccgcgccgctgc 270
               |||||||||||||||
Sbjct: 6228711 tcaccgcgccgctgc 6228697




 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 198     gaaatcaacgtcacc 212
               |||||||||||||||
Sbjct: 6264621 gaaatcaacgtcacc 6264607




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                           
Query: 259   ccgcgccgctgctg 272
             ||||||||||||||
Sbjct: 49877 ccgcgccgctgctg 49864




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 236    gctgctggtggagt 249
              ||||||||||||||
Sbjct: 133451 gctgctggtggagt 133464




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 260    cgcgccgctgctga 273
              ||||||||||||||
Sbjct: 256678 cgcgccgctgctga 256691




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 237    ctgctggtggagtt 250
              ||||||||||||||
Sbjct: 354414 ctgctggtggagtt 354427




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                
Query: 215    gctggtcgacgtgatgct 232
              ||||||||||| ||||||
Sbjct: 561808 gctggtcgacgagatgct 561825




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 255    ttcaccgcgccgct 268
              ||||||||||||||
Sbjct: 579859 ttcaccgcgccgct 579872




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 176    ggacagcgacgaag 189
              ||||||||||||||
Sbjct: 640670 ggacagcgacgaag 640657




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 256    tcaccgcgccgctg 269
              ||||||||||||||
Sbjct: 669417 tcaccgcgccgctg 669430




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 220    tcgacgtgatgctg 233
              ||||||||||||||
Sbjct: 877009 tcgacgtgatgctg 877022




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 229    tgctggagctgctg 242
              ||||||||||||||
Sbjct: 884118 tgctggagctgctg 884131




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 226    tgatgctggagctg 239
              ||||||||||||||
Sbjct: 885234 tgatgctggagctg 885247




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 179    cagcgacgaagtcc 192
              ||||||||||||||
Sbjct: 944448 cagcgacgaagtcc 944461




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 220    tcgacgtgatgctg 233
              ||||||||||||||
Sbjct: 985488 tcgacgtgatgctg 985475




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 235     agctgctggtggag 248
               ||||||||||||||
Sbjct: 1049816 agctgctggtggag 1049829




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 229     tgctggagctgctggtgg 246
               |||||| |||||||||||
Sbjct: 1102412 tgctggcgctgctggtgg 1102429




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                     
Query: 257     caccgcgccgctgctgaccaac 278
               ||||||||||||| || |||||
Sbjct: 1212384 caccgcgccgctgatggccaac 1212405




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 154     ctgacatggccttc 167
               ||||||||||||||
Sbjct: 1263153 ctgacatggccttc 1263140




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 157     acatggccttctcg 170
               ||||||||||||||
Sbjct: 1280268 acatggccttctcg 1280255




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 212     cccgctggtcgacg 225
               ||||||||||||||
Sbjct: 1413795 cccgctggtcgacg 1413782




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 229     tgctggagctgctg 242
               ||||||||||||||
Sbjct: 1544252 tgctggagctgctg 1544239




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 236     gctgctggtggagt 249
               ||||||||||||||
Sbjct: 1703097 gctgctggtggagt 1703110




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 217     tggtcgacgtgatg 230
               ||||||||||||||
Sbjct: 1830299 tggtcgacgtgatg 1830312




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 60      acagcctggcgcag 73
               ||||||||||||||
Sbjct: 1996964 acagcctggcgcag 1996951




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 262     cgccgctgctgacc 275
               ||||||||||||||
Sbjct: 2061042 cgccgctgctgacc 2061055




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 260     cgcgccgctgctga 273
               ||||||||||||||
Sbjct: 2072125 cgcgccgctgctga 2072112




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 230     gctggagctgctgg 243
               ||||||||||||||
Sbjct: 2092106 gctggagctgctgg 2092093




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 256     tcaccgcgccgctg 269
               ||||||||||||||
Sbjct: 2180407 tcaccgcgccgctg 2180394




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 209     caccccgctggtcg 222
               ||||||||||||||
Sbjct: 2651224 caccccgctggtcg 2651237




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 124     ggcctggccacgca 137
               ||||||||||||||
Sbjct: 2661576 ggcctggccacgca 2661589




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 20/22 (90%)
 Strand = Plus / Minus

                                     
Query: 212     cccgctggtcgacgtgatgctg 233
               ||||| ||||||||||| ||||
Sbjct: 2686089 cccgcgggtcgacgtgacgctg 2686068




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 260     cgcgccgctgctga 273
               ||||||||||||||
Sbjct: 2716317 cgcgccgctgctga 2716304




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 214     cgctggtcgacgtg 227
               ||||||||||||||
Sbjct: 2929374 cgctggtcgacgtg 2929361




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 220     tcgacgtgatgctg 233
               ||||||||||||||
Sbjct: 2964160 tcgacgtgatgctg 2964147




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 220     tcgacgtgatgctg 233
               ||||||||||||||
Sbjct: 2974716 tcgacgtgatgctg 2974729




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 257     caccgcgccgctgc 270
               ||||||||||||||
Sbjct: 3054808 caccgcgccgctgc 3054821




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 213     ccgctggtcgacgt 226
               ||||||||||||||
Sbjct: 3141673 ccgctggtcgacgt 3141686




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 66      tggcgcagaagagc 79
               ||||||||||||||
Sbjct: 3368376 tggcgcagaagagc 3368389




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 3381906 ccgcgccgctgctg 3381919




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 3386837 ccgcgccgctgctg 3386850




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 257     caccgcgccgctgc 270
               ||||||||||||||
Sbjct: 3485569 caccgcgccgctgc 3485582




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 169     cgacccaggacagc 182
               ||||||||||||||
Sbjct: 3528758 cgacccaggacagc 3528745




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 210     accccgctggtcga 223
               ||||||||||||||
Sbjct: 3596849 accccgctggtcga 3596862




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 63      gcctggcgcagaag 76
               ||||||||||||||
Sbjct: 3616912 gcctggcgcagaag 3616925




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 256     tcaccgcgccgctg 269
               ||||||||||||||
Sbjct: 3741365 tcaccgcgccgctg 3741352




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 174     caggacagcgacgaagtc 191
               |||||| |||||||||||
Sbjct: 3814435 caggacggcgacgaagtc 3814418




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 260     cgcgccgctgctga 273
               ||||||||||||||
Sbjct: 3844158 cgcgccgctgctga 3844145




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 257     caccgcgccgctgc 270
               ||||||||||||||
Sbjct: 3937386 caccgcgccgctgc 3937399




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 207     gtcaccccgctggt 220
               ||||||||||||||
Sbjct: 4071016 gtcaccccgctggt 4071029




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 219     gtcgacgtgatgct 232
               ||||||||||||||
Sbjct: 4257222 gtcgacgtgatgct 4257209




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 4272044 ccgcgccgctgctg 4272031




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 4297286 ccgcgccgctgctg 4297273




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 220     tcgacgtgatgctg 233
               ||||||||||||||
Sbjct: 4339904 tcgacgtgatgctg 4339891




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 97      ccatccctccgccg 110
               ||||||||||||||
Sbjct: 4477386 ccatccctccgccg 4477399




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 236     gctgctggtggagt 249
               ||||||||||||||
Sbjct: 4502098 gctgctggtggagt 4502111




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                     
Query: 73      gaagagcgcgttccgcgtcatc 94
               |||||||||  |||||||||||
Sbjct: 4519520 gaagagcgcaatccgcgtcatc 4519541




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 262     cgccgctgctgacc 275
               ||||||||||||||
Sbjct: 4584939 cgccgctgctgacc 4584952




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 257     caccgcgccgctgc 270
               ||||||||||||||
Sbjct: 4680192 caccgcgccgctgc 4680179




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 64      cctggcgcagaaga 77
               ||||||||||||||
Sbjct: 4737903 cctggcgcagaaga 4737916




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 109     cgcgcatcatgtgg 122
               ||||||||||||||
Sbjct: 4770176 cgcgcatcatgtgg 4770189




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 219     gtcgacgtgatgct 232
               ||||||||||||||
Sbjct: 4951269 gtcgacgtgatgct 4951282




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 220     tcgacgtgatgctg 233
               ||||||||||||||
Sbjct: 5015637 tcgacgtgatgctg 5015650




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 123     gggcctggccacgc 136
               ||||||||||||||
Sbjct: 5081225 gggcctggccacgc 5081238




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 185     cgaagtcctttccg 198
               ||||||||||||||
Sbjct: 5112963 cgaagtcctttccg 5112950




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 262     cgccgctgctgacc 275
               ||||||||||||||
Sbjct: 5319524 cgccgctgctgacc 5319537




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 5321047 ccgcgccgctgctg 5321060




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 229     tgctggagctgctg 242
               ||||||||||||||
Sbjct: 5400982 tgctggagctgctg 5400995




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 267     ctgctgaccaactc 280
               ||||||||||||||
Sbjct: 5517219 ctgctgaccaactc 5517232




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 78      gcgcgttccgcgtc 91
               ||||||||||||||
Sbjct: 5561468 gcgcgttccgcgtc 5561481




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 61      cagcctggcgcaga 74
               ||||||||||||||
Sbjct: 5747680 cagcctggcgcaga 5747667




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 5835823 ccgcgccgctgctg 5835810




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 229     tgctggagctgctg 242
               ||||||||||||||
Sbjct: 5894842 tgctggagctgctg 5894829




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 258     accgcgccgctgct 271
               ||||||||||||||
Sbjct: 6054440 accgcgccgctgct 6054427




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 256     tcaccgcgccgctg 269
               ||||||||||||||
Sbjct: 6159024 tcaccgcgccgctg 6159037




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 63      gcctggcgcagaag 76
               ||||||||||||||
Sbjct: 6221933 gcctggcgcagaag 6221946




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 6374049 ccgcgccgctgctg 6374062




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 63      gcctggcgcagaag 76
               ||||||||||||||
Sbjct: 6385940 gcctggcgcagaag 6385927




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 260     cgcgccgctgctga 273
               ||||||||||||||
Sbjct: 6438622 cgcgccgctgctga 6438609




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 259     ccgcgccgctgctg 272
               ||||||||||||||
Sbjct: 6451266 ccgcgccgctgctg 6451253




 Score = 28.2 bits (14), Expect = 5.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 66      tggcgcagaagagc 79
               ||||||||||||||
Sbjct: 6493014 tggcgcagaagagc 6493027




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3208
Number of Sequences: 1
Number of extensions: 3208
Number of successful extensions: 123
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of query: 290
length of database: 6,534,396
effective HSP length: 16
effective length of query: 274
effective length of database: 6,534,380
effective search space: 1790420120
effective search space used: 1790420120
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)