Score E
Sequences producing significant alignments: (bits) Value
GCTS_68 876 0.0
>GCTS_68
Length = 6534396
Score = 876 bits (442), Expect = 0.0
Identities = 483/496 (97%), Gaps = 2/496 (0%)
Strand = Plus / Minus
Query: 49 tacgcccactacctgcgcaacctcggctatcgcacggcgctgtcgggcaagatgcacttc 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835614 tacgcccactacctgcgcaacctcggctatcgcacggcgctgtcgggcaagatgcacttc 5835555
Query: 109 tgcggtcccgaccagttgcacggctacgaggaacgcctgaccagcgacatctatccggcg 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835554 tgcggtcccgaccagttgcacggctacgaggaacgcctgaccagcgacatctatccggcg 5835495
Query: 169 gactatggctgggcggtgaactgggacgagccggaggtgcgcccgagctggtaccacaac 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835494 gactatggctgggcggtgaactgggacgagccggaggtgcgcccgagctggtaccacaac 5835435
Query: 229 atgtcctcggttttgcaggccggtccctgcgtgcgcaccaaccagctggacttcgacgag 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835434 atgtcctcggttttgcaggccggtccctgcgtgcgcaccaaccagctggacttcgacgag 5835375
Query: 289 gaggtggtgttcaaggcccgccagtacctctacgaccatgttcgccagcacgccggccag 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835374 gaggtggtgttcaaggcccgccagtacctctacgaccatgttcgccagcacgccggccag 5835315
Query: 349 ccattctgcctgaccgtgtcgatgacccatacgcacgacccctatcgtctgccgngccta 408
|||||||||||||||||||||||||||||| ||||||||||||| | | ||| | |
Sbjct: 5835314 ccattctgcctgaccgtgtcgatgacccatccgcacgacccctacagcatcccgg--cga 5835257
Query: 409 gctcatggaatctctaccgcgacgaggacatcccgctgccgcgccagcgcttctcccagg 468
||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5835256 gctactggaatctctaccgcgacgaggacatcccgctgccgcgccagcgcttcgcccagg 5835197
Query: 469 aggagcaggaccctcattcgcaacgcctgctgaaggtcatcgacctgtgggacaagccgt 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835196 aggagcaggaccctcattcgcaacgcctgctgaaggtcatcgacctgtgggacaagccgt 5835137
Query: 529 tgcccgaggagcgcat 544
||||||||||||||||
Sbjct: 5835136 tgcccgaggagcgcat 5835121
Score = 38.2 bits (19), Expect = 0.011
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 112 ggtcccgaccagttgcacg 130
|||||||||||||||||||
Sbjct: 3066219 ggtcccgaccagttgcacg 3066237
Score = 38.2 bits (19), Expect = 0.011
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 336 gcacgccggccagccattc 354
|||||||||||||||||||
Sbjct: 4381013 gcacgccggccagccattc 4381031
Score = 38.2 bits (19), Expect = 0.011
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 428 cgacgaggacatcccgctg 446
|||||||||||||||||||
Sbjct: 4660313 cgacgaggacatcccgctg 4660295
Score = 36.2 bits (18), Expect = 0.044
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 426 cgcgacgaggacatcccgctgc 447
|||| |||||||||||||||||
Sbjct: 5352394 cgcggcgaggacatcccgctgc 5352415
Score = 34.2 bits (17), Expect = 0.18
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 421 tctaccgcgacgaggac 437
|||||||||||||||||
Sbjct: 1702964 tctaccgcgacgaggac 1702980
Score = 34.2 bits (17), Expect = 0.18
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 177 ctgggcggtgaactgggacga 197
|||| ||||||||||||||||
Sbjct: 1849009 ctggtcggtgaactgggacga 1848989
Score = 34.2 bits (17), Expect = 0.18
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 324 ccatgttcgccagcacg 340
|||||||||||||||||
Sbjct: 2656096 ccatgttcgccagcacg 2656080
Score = 34.2 bits (17), Expect = 0.18
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 135 cgaggaacgcctgacca 151
|||||||||||||||||
Sbjct: 3750553 cgaggaacgcctgacca 3750569
Score = 34.2 bits (17), Expect = 0.18
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 59 acctgcgcaacctcggc 75
|||||||||||||||||
Sbjct: 4177473 acctgcgcaacctcggc 4177489
Score = 34.2 bits (17), Expect = 0.18
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 431 cgaggacatcccgctgc 447
|||||||||||||||||
Sbjct: 4632060 cgaggacatcccgctgc 4632076
Score = 34.2 bits (17), Expect = 0.18
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 431 cgaggacatcccgctgc 447
|||||||||||||||||
Sbjct: 5740418 cgaggacatcccgctgc 5740402
Score = 34.2 bits (17), Expect = 0.18
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 334 cagcacgccggccagccattc 354
|||| ||||||||||||||||
Sbjct: 6184561 cagctcgccggccagccattc 6184581
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 177 ctgggcggtgaactgg 192
||||||||||||||||
Sbjct: 26403 ctgggcggtgaactgg 26418
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 270 ccagctggacttcgac 285
||||||||||||||||
Sbjct: 52263 ccagctggacttcgac 52248
Score = 32.2 bits (16), Expect = 0.69
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 332 gccagcacgccggccagcca 351
||||||||||| ||||||||
Sbjct: 313031 gccagcacgcctgccagcca 313050
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 325 catgttcgccagcacg 340
||||||||||||||||
Sbjct: 369567 catgttcgccagcacg 369582
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 334 cagcacgccggccagc 349
||||||||||||||||
Sbjct: 621744 cagcacgccggccagc 621729
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 117 cgaccagttgcacggc 132
||||||||||||||||
Sbjct: 897341 cgaccagttgcacggc 897356
Score = 32.2 bits (16), Expect = 0.69
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 62 tgcgcaacctcggctatcgc 81
|||||| |||||||||||||
Sbjct: 1064363 tgcgcagcctcggctatcgc 1064344
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 494 cctgctgaaggtcatc 509
||||||||||||||||
Sbjct: 1065025 cctgctgaaggtcatc 1065010
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 501 aaggtcatcgacctgt 516
||||||||||||||||
Sbjct: 2172062 aaggtcatcgacctgt 2172077
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 333 ccagcacgccggccag 348
||||||||||||||||
Sbjct: 2572977 ccagcacgccggccag 2572962
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 452 ccagcgcttctcccag 467
||||||||||||||||
Sbjct: 2810530 ccagcgcttctcccag 2810515
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 60 cctgcgcaacctcggc 75
||||||||||||||||
Sbjct: 2905854 cctgcgcaacctcggc 2905869
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 196 gagccggaggtgcgcc 211
||||||||||||||||
Sbjct: 3316644 gagccggaggtgcgcc 3316659
Score = 32.2 bits (16), Expect = 0.69
Identities = 25/28 (89%)
Strand = Plus / Plus
Query: 161 atccggcggactatggctgggcggtgaa 188
||||||||||| ||||||||||||||
Sbjct: 3324554 atccggcggacgccggctgggcggtgaa 3324581
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 326 atgttcgccagcacgc 341
||||||||||||||||
Sbjct: 3766272 atgttcgccagcacgc 3766287
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 275 tggacttcgacgagga 290
||||||||||||||||
Sbjct: 4660320 tggacttcgacgagga 4660305
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 422 ctaccgcgacgaggac 437
||||||||||||||||
Sbjct: 4814756 ctaccgcgacgaggac 4814741
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 331 cgccagcacgccggcc 346
||||||||||||||||
Sbjct: 5067097 cgccagcacgccggcc 5067082
Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 332 gccagcacgccggcca 347
||||||||||||||||
Sbjct: 6190497 gccagcacgccggcca 6190482
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 62 tgcgcaacctcggct 76
|||||||||||||||
Sbjct: 555614 tgcgcaacctcggct 555600
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 137 aggaacgcctgacca 151
|||||||||||||||
Sbjct: 594353 aggaacgcctgacca 594367
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 61 ctgcgcaacctcggc 75
|||||||||||||||
Sbjct: 656044 ctgcgcaacctcggc 656030
Score = 30.2 bits (15), Expect = 2.7
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 331 cgccagcacgccggccagc 349
||||||||||| |||||||
Sbjct: 914562 cgccagcacgcgggccagc 914544
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 92 cgggcaagatgcact 106
|||||||||||||||
Sbjct: 1050552 cgggcaagatgcact 1050566
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 335 agcacgccggccagc 349
|||||||||||||||
Sbjct: 1399570 agcacgccggccagc 1399556
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 59 acctgcgcaacctcg 73
|||||||||||||||
Sbjct: 1486804 acctgcgcaacctcg 1486790
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 331 cgccagcacgccggc 345
|||||||||||||||
Sbjct: 1629257 cgccagcacgccggc 1629243
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 291 ggtggtgttcaaggc 305
|||||||||||||||
Sbjct: 1742961 ggtggtgttcaaggc 1742975
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 330 tcgccagcacgccgg 344
|||||||||||||||
Sbjct: 1860093 tcgccagcacgccgg 1860079
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 56 actacctgcgcaacc 70
|||||||||||||||
Sbjct: 2002283 actacctgcgcaacc 2002297
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 52 gcccactacctgcgc 66
|||||||||||||||
Sbjct: 2038319 gcccactacctgcgc 2038305
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 444 ctgccgcgccagcgc 458
|||||||||||||||
Sbjct: 2053976 ctgccgcgccagcgc 2053990
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 159 ctatccggcggacta 173
|||||||||||||||
Sbjct: 2420469 ctatccggcggacta 2420455
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 142 cgcctgaccagcgac 156
|||||||||||||||
Sbjct: 2651318 cgcctgaccagcgac 2651332
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 271 cagctggacttcgac 285
|||||||||||||||
Sbjct: 2735739 cagctggacttcgac 2735725
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 281 tcgacgaggaggtgg 295
|||||||||||||||
Sbjct: 2958125 tcgacgaggaggtgg 2958111
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 331 cgccagcacgccggc 345
|||||||||||||||
Sbjct: 3203248 cgccagcacgccggc 3203262
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 447 ccgcgccagcgcttc 461
|||||||||||||||
Sbjct: 3205227 ccgcgccagcgcttc 3205241
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 490 aacgcctgctgaagg 504
|||||||||||||||
Sbjct: 3291625 aacgcctgctgaagg 3291611
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 272 agctggacttcgacg 286
|||||||||||||||
Sbjct: 3308434 agctggacttcgacg 3308448
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 492 cgcctgctgaaggtc 506
|||||||||||||||
Sbjct: 3588830 cgcctgctgaaggtc 3588844
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 271 cagctggacttcgac 285
|||||||||||||||
Sbjct: 3796728 cagctggacttcgac 3796742
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 334 cagcacgccggccag 348
|||||||||||||||
Sbjct: 4151034 cagcacgccggccag 4151048
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 417 aatctctaccgcgac 431
|||||||||||||||
Sbjct: 4295826 aatctctaccgcgac 4295812
Score = 30.2 bits (15), Expect = 2.7
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 330 tcgccagcacgccggccag 348
||||| |||||||||||||
Sbjct: 4318893 tcgccggcacgccggccag 4318911
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 331 cgccagcacgccggc 345
|||||||||||||||
Sbjct: 4692925 cgccagcacgccggc 4692939
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 441 ccgctgccgcgccag 455
|||||||||||||||
Sbjct: 4916457 ccgctgccgcgccag 4916443
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 421 tctaccgcgacgagg 435
|||||||||||||||
Sbjct: 5069388 tctaccgcgacgagg 5069374
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 62 tgcgcaacctcggct 76
|||||||||||||||
Sbjct: 5140413 tgcgcaacctcggct 5140399
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 333 ccagcacgccggcca 347
|||||||||||||||
Sbjct: 5363337 ccagcacgccggcca 5363351
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 112 ggtcccgaccagttg 126
|||||||||||||||
Sbjct: 5367099 ggtcccgaccagttg 5367085
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 361 accgtgtcgatgacc 375
|||||||||||||||
Sbjct: 5622445 accgtgtcgatgacc 5622431
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 446 gccgcgccagcgctt 460
|||||||||||||||
Sbjct: 5692170 gccgcgccagcgctt 5692156
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 61 ctgcgcaacctcggc 75
|||||||||||||||
Sbjct: 5736255 ctgcgcaacctcggc 5736269
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 357 cctgaccgtgtcgat 371
|||||||||||||||
Sbjct: 5761237 cctgaccgtgtcgat 5761251
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 274 ctggacttcgacgag 288
|||||||||||||||
Sbjct: 5906031 ctggacttcgacgag 5906045
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 61 ctgcgcaacctcggc 75
|||||||||||||||
Sbjct: 5963395 ctgcgcaacctcggc 5963409
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 446 gccgcgccagcgctt 460
|||||||||||||||
Sbjct: 6008447 gccgcgccagcgctt 6008461
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 273 gctggacttcgacga 287
|||||||||||||||
Sbjct: 6034227 gctggacttcgacga 6034241
Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 61 ctgcgcaacctcggc 75
|||||||||||||||
Sbjct: 6217012 ctgcgcaacctcggc 6217026
Score = 30.2 bits (15), Expect = 2.7
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 171 ctatggctgggcggtgaac 189
||||| |||||||||||||
Sbjct: 6361093 ctatgtctgggcggtgaac 6361075
Score = 30.2 bits (15), Expect = 2.7
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 331 cgccagcacgccggccagc 349
||||||| |||||||||||
Sbjct: 6475345 cgccagcgcgccggccagc 6475327
Score = 30.2 bits (15), Expect = 2.7
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 189 ctgggacgagccggaggtg 207
||||||||||||| |||||
Sbjct: 6522094 ctgggacgagccgaaggtg 6522112